Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AO275_25620 | Not Available | Positive | 1003591 - 1004070 | 18145.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AO275_25625 | Not Available | Positive | 1004166 - 1005422 | 43490.3 |
| transcriptional regulator | AO275_25630 | Not Available | Negative | 1005445 - 1006101 | 23576.7 |
| rna polymerase subunit sigma | AO275_25635 | Not Available | Negative | 1006101 - 1006709 | 23464.0 |
| aldose epimerase | AO275_25640 | Not Available | Negative | 1007054 - 1007923 | 31975.8 |
| hypothetical protein | AO275_25645 | Not Available | Negative | 1007898 - 1008878 | 34682.5 |
| hypothetical protein | AO275_25650 | Not Available | Negative | 1008969 - 1010249 | 45174.8 |
| c4-dicarboxylate abc transporter | AO275_25655 | Not Available | Negative | 1010250 - 1010777 | 19255.3 |
| c4-dicarboxylate abc transporter | AO275_25660 | Not Available | Negative | 1010841 - 1011863 | 37431.3 |
| gluconolactonase | AO275_25665 | Not Available | Negative | 1011945 - 1012829 | 31921.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
