Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AO275_25520 | Not Available | Negative | 982419 - 983339 | 31718.3 |
| abc transporter permease | AO275_25525 | Not Available | Negative | 983332 - 984441 | 38578.7 |
| abc transporter substrate-binding protein | AO275_25530 | Not Available | Negative | 984452 - 985561 | 39479.6 |
| allophanate hydrolase | AO275_25535 | Not Available | Negative | 985577 - 987385 | 63935.9 |
| hypothetical protein | AO275_25540 | Not Available | Positive | 987360 - 987608 | 8788.09 |
| gdp-6-deoxy-d-lyxo-4-hexulose reductase | AO275_25545 | Not Available | Negative | 987839 - 988735 | 32444.9 |
| gdp-mannose 4,6-dehydratase | AO275_25550 | Not Available | Negative | 988735 - 989766 | 38600.2 |
| chemotaxis protein | AO275_25555 | Not Available | Positive | 990030 - 991343 | 47800.7 |
| alkaline phosphatase | AO275_25560 | Not Available | Negative | 991389 - 992960 | 58249.4 |
| gnat family acetyltransferase | AO275_25565 | Not Available | Negative | 992953 - 993516 | 20521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
