Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phca | AO275_25320 | Not Available | Negative | 940396 - 941943 | 57599.8 |
| hypothetical protein | AO275_25325 | Not Available | Negative | 942271 - 942987 | 25689.7 |
| histidine kinase | AO275_25330 | Not Available | Positive | 943180 - 944439 | 46618.8 |
| chemotaxis protein chey | AO275_25335 | Not Available | Positive | 944436 - 944999 | 20788.1 |
| abc transporter atp-binding protein | AO275_25340 | Not Available | Positive | 945089 - 946822 | 65594.9 |
| gntr family transcriptional regulator | AO275_25345 | Not Available | Positive | 946923 - 947672 | 27801.8 |
| hypothetical protein | AO275_25350 | Not Available | Negative | 947805 - 947987 | 6427.77 |
| 5-dehydro-4-deoxyglucarate dehydratase | AO275_25355 | Not Available | Positive | 948119 - 949030 | 32743.4 |
| glucarate transporter | AO275_25360 | Not Available | Positive | 949196 - 950578 | 49914.6 |
| galactarate dehydratase | AO275_25365 | Not Available | Positive | 950589 - 952142 | 55985.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
