Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | AO275_25270 | Not Available | Positive | 925096 - 927636 | 92844.3 |
| peptide abc transporter atp-binding protein | AO275_25275 | Not Available | Negative | 927700 - 928674 | 35799.4 |
| peptide abc transporter atp-binding protein | AO275_25280 | Not Available | Negative | 928674 - 929642 | 34686.5 |
| peptide transporter | AO275_25285 | Not Available | Negative | 929653 - 930564 | 32597.9 |
| peptide abc transporter permease | AO275_25290 | Not Available | Negative | 930575 - 931585 | 36918.3 |
| peptide abc transporter substrate-binding protein | AO275_25295 | Not Available | Negative | 931657 - 933252 | 59025.3 |
| porin | AO275_25300 | Not Available | Negative | 933319 - 934734 | 52190.4 |
| peptide abc transporter substrate-binding protein | AO275_25305 | Not Available | Negative | 934891 - 936489 | 59763.9 |
| peptide abc transporter substrate-binding protein | AO275_25310 | Not Available | Negative | 936802 - 938424 | 60306.9 |
| peptide abc transporter substrate-binding protein | AO275_25315 | Not Available | Negative | 938689 - 940290 | 59652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
