Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| structural protein mipa | AO275_06710 | Not Available | Positive | 866062 - 866895 | 29545.6 |
| secretion protein hlyd | AO275_06715 | Not Available | Positive | 866945 - 868045 | 38240.7 |
| acriflavin resistance protein | AO275_06720 | Not Available | Positive | 868042 - 871128 | 110487.0 |
| gntr family transcriptional regulator | AO275_06725 | Not Available | Negative | 871280 - 872689 | 51953.8 |
| glutathione s-transferase | AO275_06730 | Not Available | Positive | 872837 - 873463 | 23003.5 |
| acyl-coa thioesterase | AO275_06735 | Not Available | Positive | 873591 - 874367 | 28026.5 |
| shlb family hemolysin secretion/activation protein | AO275_06740 | Not Available | Positive | 874519 - 876216 | 62830.8 |
| hypothetical protein | AO275_06755 | Not Available | Positive | 893368 - 893730 | 14091.8 |
| hypothetical protein | AO275_06760 | Not Available | Positive | 894093 - 894347 | 9684.68 |
| dna-binding protein | AO275_25115 | Not Available | Negative | 896048 - 897247 | 43756.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
