Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein | AO275_08860 | Not Available | Negative | 3279970 - 3281076 | 40075.4 |
| Tail/dna circulation protein | AO275_08865 | Not Available | Negative | 3281080 - 3282498 | 49930.1 |
| Putative tail protein | AO275_08870 | Not Available | Negative | 3282495 - 3284777 | 80182.9 |
| Putative bacteriophage protein | AO275_08875 | Not Available | Negative | 3284908 - 3285204 | 10598.7 |
| Tail tube protein | AO275_08880 | Not Available | Negative | 3285201 - 3285548 | 12417.8 |
| Tail sheath protein | AO275_08885 | Not Available | Negative | 3285616 - 3287112 | 53307.2 |
| Hypothetical protein | AO275_08890 | Not Available | Negative | 3287131 - 3287316 | 6796.77 |
| Hypothetical protein | AO275_08895 | Not Available | Negative | 3287313 - 3287903 | 21313.1 |
| Lipoprotein | AO275_08900 | Not Available | Negative | 3287990 - 3288328 | 12280.7 |
| Holin | AO275_08905 | Not Available | Negative | 3288309 - 3288698 | 14152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
