Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_06410 | Not Available | Positive | 791691 - 792524 | 29318.0 |
| chemotaxis protein | AO275_06415 | Not Available | Positive | 792714 - 794699 | 71805.8 |
| rhizopine-binding protein | AO275_06420 | Not Available | Positive | 794717 - 795637 | 33182.0 |
| endonuclease | AO275_06425 | Not Available | Negative | 795665 - 796615 | 35524.8 |
| c4-dicarboxylate abc transporter permease | AO275_06430 | Not Available | Positive | 797201 - 797758 | 20403.7 |
| l-dehydroascorbate transporter large permease subunit | AO275_06435 | Not Available | Positive | 797755 - 799035 | 44898.5 |
| abc transporter substrate-binding protein | AO275_06440 | Not Available | Positive | 799099 - 800118 | 37212.7 |
| histidine kinase | AO275_06445 | Not Available | Positive | 800314 - 801927 | 56984.0 |
| chemotaxis protein | AO275_06450 | Not Available | Positive | 802106 - 803902 | 65714.5 |
| cytoplasmic protein | AO275_06455 | Not Available | Negative | 803957 - 804328 | 13935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
