Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit iii | AO275_06155 | Not Available | Negative | 736036 - 736650 | 22714.8 |
| cytochrome o ubiquinol oxidase subunit i | AO275_06160 | Not Available | Negative | 736653 - 738626 | 73871.5 |
| ubiquinol oxidase subunit ii | AO275_06165 | Not Available | Negative | 738628 - 739539 | 33962.2 |
| clp protease | AO275_06175 | Not Available | Negative | 740531 - 741082 | 20318.5 |
| general stress protein | AO275_06180 | Not Available | Negative | 741301 - 741483 | 6124.81 |
| chemotaxis protein | AO275_06185 | Not Available | Positive | 742259 - 744391 | 79768.1 |
| chemotaxis protein chew | AO275_06190 | Not Available | Positive | 744388 - 745866 | 53389.6 |
| gnat family acetyltransferase | AO275_06195 | Not Available | Negative | 746136 - 746618 | 17974.2 |
| hypothetical protein | AO275_06200 | Not Available | Negative | 746687 - 747085 | 14978.2 |
| branched-chain amino acid abc transporter permease | AO275_06205 | Not Available | Positive | 747330 - 748031 | 24882.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
