Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Carbamoyl phosphate synthase small subunit | AO275_08810 | Not Available | Negative | 3272331 - 3272930 | 21856.2 |
| Rz-like phage lysis protein | AO275_08815 | Not Available | Negative | 3273326 - 3273808 | 17321.5 |
| Glycoside hydrolase family 19 protein | AO275_08820 | Not Available | Negative | 3273832 - 3274377 | 19962.0 |
| phage tail protein | AO275_08825 | Not Available | Negative | 3274401 - 3275405 | 36710.5 |
| Putative tail fiber assembly protein | AO275_08830 | Not Available | Negative | 3275530 - 3276042 | 18736.2 |
| Tail protein | AO275_08835 | Not Available | Negative | 3276056 - 3277438 | 48677.0 |
| Tail protein | AO275_08840 | Not Available | Negative | 3277449 - 3278048 | 22371.7 |
| Tail protein | AO275_08845 | Not Available | Negative | 3278036 - 3279076 | 36959.6 |
| Putative tail protein | AO275_08850 | Not Available | Negative | 3279066 - 3279464 | 15329.2 |
| Putative base plate assembly protein | AO275_08855 | Not Available | Negative | 3279464 - 3279973 | 17957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
