Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase | AO275_18425 | Not Available | Negative | 620430 - 621464 | 36129.6 |
| phosphonate abc transporter substrate-binding protein | AO275_18430 | Not Available | Positive | 621700 - 622551 | 30859.0 |
| phosphonate abc transporter | AO275_18435 | Not Available | Positive | 622548 - 623348 | 28691.9 |
| abc transporter permease | AO275_18440 | Not Available | Positive | 623342 - 624169 | 29243.5 |
| phosphonate abc transporter permease | AO275_18445 | Not Available | Positive | 624166 - 624933 | 27253.9 |
| gamma-glutamyltranspeptidase | AO275_18450 | Not Available | Negative | 625033 - 626760 | 61312.3 |
| chemotaxis protein chey | AO275_18455 | Not Available | Positive | 627022 - 627786 | 28663.6 |
| atpase | AO275_18460 | Not Available | Positive | 627816 - 629150 | 48763.1 |
| ligand-gated channel protein | AO275_18465 | Not Available | Negative | 629340 - 631307 | 72642.4 |
| 3-hydroxyisobutyrate dehydrogenase | AO275_18470 | Not Available | Negative | 631389 - 632276 | 30417.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
