Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| palmitoyl-coa hydrolase | AO275_18375 | Not Available | Negative | 611579 - 612448 | 32702.6 |
| gnat family acetyltransferase | AO275_18380 | Not Available | Negative | 612572 - 613141 | 21358.7 |
| histone deacetylase superfamily protein | AO275_18385 | Not Available | Positive | 613260 - 614177 | 34097.6 |
| nad(fad)-utilizing dehydrogenase | AO275_18390 | Not Available | Positive | 614205 - 615482 | 45844.6 |
| lysr family transcriptional regulator | AO275_18395 | Not Available | Negative | 615532 - 616428 | 33503.2 |
| nadph quinone reductase mdab | AO275_18400 | Not Available | Negative | 616471 - 617052 | 21632.5 |
| antibiotic biosynthesis monooxygenase | AO275_18405 | Not Available | Positive | 617243 - 617578 | 12737.0 |
| hypothetical protein | AO275_18410 | Not Available | Negative | 617532 - 618296 | 26492.6 |
| lysr family transcriptional regulator | AO275_18415 | Not Available | Positive | 618396 - 619283 | 32393.2 |
| trna 2-selenouridine synthase | AO275_18420 | Not Available | Negative | 619324 - 620430 | 41575.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
