Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit i | AO275_18325 | Not Available | Negative | 598915 - 600354 | 53332.5 |
| aldehyde oxidase | AO275_18330 | Not Available | Negative | 600735 - 602936 | 79026.5 |
| fad-binding molybdopterin dehydrogenase | AO275_18335 | Not Available | Negative | 602933 - 603922 | 35330.2 |
| (2fe-2s)-binding protein | AO275_18340 | Not Available | Negative | 603919 - 604461 | 19248.0 |
| guanine permease | AO275_18345 | Not Available | Positive | 604738 - 606033 | 45051.7 |
| trna (uracil-5-)-methyltransferase | AO275_18350 | Not Available | Positive | 606030 - 607115 | 41196.0 |
| mfs transporter | AO275_18355 | Not Available | Positive | 607449 - 608735 | 45491.9 |
| metallopeptidase | AO275_18360 | Not Available | Positive | 608928 - 609818 | 31844.3 |
| hypothetical protein | AO275_18365 | Not Available | Positive | 609823 - 610812 | 36804.2 |
| had family hydrolase | AO275_18370 | Not Available | Negative | 610992 - 611582 | 21455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
