Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation protein a | AO275_18280 | Not Available | Negative | 590056 - 592131 | 74121.7 |
| pilus assembly protein | AO275_18285 | Not Available | Positive | 592414 - 592782 | 14122.9 |
| dna repair protein rada | AO275_18290 | Not Available | Negative | 592789 - 594156 | 48906.4 |
| large-conductance mechanosensitive channel | AO275_18295 | Not Available | Positive | 594348 - 594794 | 15631.5 |
| ferredoxin-nadp reductase | AO275_18300 | Not Available | Negative | 595011 - 595787 | 29641.5 |
| hypothetical protein | AO275_18305 | Not Available | Positive | 596129 - 596362 | 8309.23 |
| 50s rrna methyltransferase | AO275_18310 | Not Available | Positive | 596494 - 597618 | 40624.1 |
| hypothetical protein | AO275_18315 | Not Available | Negative | 597715 - 597882 | 6047.53 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 598710 - 598825 | Not Available |
| ubiquinol oxidase subunit ii | AO275_18320 | Not Available | Negative | 597904 - 598911 | 37087.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
