Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | AO275_18080 | Not Available | Positive | 547700 - 549292 | 58439.2 |
| transcriptional regulator | AO275_18085 | Not Available | Positive | 549295 - 550635 | 49825.0 |
| d-amino acid oxidase | AO275_18090 | Not Available | Negative | 550823 - 551935 | 39789.1 |
| pilus assembly protein | AO275_18095 | Not Available | Negative | 551963 - 552364 | 14323.0 |
| pilus assembly protein | AO275_18100 | Not Available | Negative | 552376 - 555621 | 114953.0 |
| pilus assembly protein pilx | AO275_18105 | Not Available | Negative | 555608 - 556114 | 17316.1 |
| pilus assembly protein pilw | AO275_18110 | Not Available | Negative | 556126 - 556830 | 25283.6 |
| pilus assembly protein pilv | AO275_18115 | Not Available | Negative | 556827 - 557345 | 17911.3 |
| general secretion pathway protein gsph | AO275_18120 | Not Available | Negative | 557345 - 557827 | 16751.4 |
| general secretion pathway protein gsph | AO275_18125 | Not Available | Positive | 557959 - 558459 | 18026.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
