Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor sulfurase | AO275_17970 | Not Available | Positive | 526947 - 527492 | 20344.4 |
| 50s ribosomal protein l13 | AO275_17975 | Not Available | Positive | 527506 - 527679 | 6754.42 |
| nadh dehydrogenase | AO275_17980 | Not Available | Positive | 527743 - 529041 | 46622.4 |
| molybdenum abc transporter substrate-binding protein | AO275_17985 | Not Available | Positive | 529324 - 530103 | 27354.0 |
| Trna-pro | Not Available | Not Available | Positive | 530312 - 530388 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 530486 - 530565 | Not Available |
| cobyrinic acid a,c-diamide synthase | AO275_18000 | Not Available | Positive | 530628 - 531488 | 31057.8 |
| hypothetical protein | AO275_18005 | Not Available | Negative | 531565 - 532125 | 19923.0 |
| transposase | AO275_18010 | Not Available | Positive | 532150 - 532395 | 9761.63 |
| hypothetical protein | AO275_18020 | Not Available | Negative | 536383 - 537573 | 43923.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
