Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase tatd | AO275_17820 | Not Available | Positive | 499332 - 500120 | 29673.5 |
| hypothetical protein | AO275_17825 | Not Available | Negative | 500128 - 500964 | 30499.9 |
| n-acetyl-anhydromuranmyl-l-alanine amidase | AO275_17830 | Not Available | Negative | 500980 - 501528 | 20199.6 |
| thymidine phosphorylase | AO275_17835 | Not Available | Negative | 501694 - 503934 | 83487.7 |
| nicotinate-nucleotide pyrophosphorylase | AO275_17840 | Not Available | Positive | 504269 - 505117 | 30282.5 |
| hypothetical protein | AO275_17845 | Not Available | Positive | 505175 - 506263 | 38078.8 |
| tellurium resistance protein | AO275_17850 | Not Available | Positive | 506317 - 507558 | 45179.0 |
| chemical-damaging agent resistance protein c | AO275_17855 | Not Available | Negative | 507630 - 508208 | 20295.7 |
| chemical-damaging agent resistance protein c | AO275_17860 | Not Available | Negative | 508245 - 508820 | 20473.9 |
| tellurium resistance protein terc | AO275_17865 | Not Available | Negative | 508850 - 509884 | 37931.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
