Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | AO275_17770 | Not Available | Positive | 486161 - 487606 | 53114.4 |
| hypothetical protein | AO275_17775 | Not Available | Positive | 487794 - 488165 | 13459.9 |
| conjugal transfer protein trar | AO275_17780 | Not Available | Positive | 488219 - 489250 | 36137.2 |
| 4-carboxymuconolactone decarboxylase | AO275_17785 | Not Available | Positive | 489291 - 489674 | 13918.5 |
| malate transporter | AO275_17790 | Not Available | Negative | 489688 - 490629 | 33360.8 |
| alkaline phosphatase | AO275_17795 | Not Available | Negative | 490724 - 492298 | 59153.1 |
| pts fructose transporter subunit iibc | AO275_17800 | Not Available | Negative | 492439 - 494181 | 59857.8 |
| 1-phosphofructokinase | AO275_17805 | Not Available | Negative | 494194 - 495135 | 32894.8 |
| pts fructose transporter subunit iia | AO275_17810 | Not Available | Negative | 495135 - 498002 | 102410.0 |
| transcriptional regulator | AO275_17815 | Not Available | Positive | 498340 - 499335 | 36488.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
