Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease tldd | AO275_17720 | Not Available | Negative | 472920 - 474359 | 50239.6 |
| carbon-nitrogen hydrolase | AO275_17725 | Not Available | Negative | 474362 - 475207 | 30441.1 |
| hypothetical protein | AO275_17730 | Not Available | Negative | 475256 - 479071 | 137592.0 |
| ribonuclease g | AO275_17735 | Not Available | Negative | 479252 - 480709 | 54708.3 |
| septum formation protein maf | AO275_17740 | Not Available | Negative | 480706 - 481308 | 21139.2 |
| rod shape-determining protein mred | AO275_17745 | Not Available | Negative | 481372 - 481863 | 18482.7 |
| rod shape-determining protein mrec | AO275_17750 | Not Available | Negative | 481856 - 482926 | 38188.1 |
| rod shape-determining protein mreb | AO275_17755 | Not Available | Negative | 483153 - 484190 | 37005.8 |
| glutamyl-trna amidotransferase | AO275_17760 | Not Available | Positive | 484397 - 484684 | 10475.5 |
| glutamyl-trna amidotransferase | AO275_17765 | Not Available | Positive | 484699 - 486150 | 51877.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
