Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | AO275_19810 | Not Available | Negative | 5792430 - 5793320 | 33018.7 |
| chorismate--pyruvate lyase | AO275_19815 | Not Available | Negative | 5793320 - 5793880 | 20799.7 |
| rubredoxin | AO275_19820 | Not Available | Positive | 5794067 - 5794234 | 6190.39 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_19825 | Not Available | Positive | 5794258 - 5795406 | 40251.0 |
| integration host factor | AO275_19830 | Not Available | Positive | 5795595 - 5795894 | 10695.0 |
| hypothetical protein | AO275_19835 | Not Available | Positive | 5796161 - 5796601 | 14987.0 |
| helicase | AO275_19840 | Not Available | Positive | 5796756 - 5797133 | 14287.6 |
| hypothetical protein | AO275_19845 | Not Available | Negative | 5797134 - 5799095 | 73343.2 |
| hypothetical protein | AO275_19850 | Not Available | Negative | 5799092 - 5799412 | 11261.4 |
| holliday junction resolvase | AO275_19855 | Not Available | Negative | 5799451 - 5799756 | 10798.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
