Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease | AO275_19760 | Not Available | Positive | 5777215 - 5778885 | 60840.5 |
| phosphate abc transporter atp-binding protein | AO275_19765 | Not Available | Positive | 5778956 - 5779789 | 31092.6 |
| transcriptional regulator phou | AO275_19770 | Not Available | Positive | 5779860 - 5780624 | 28954.6 |
| chemotaxis protein chey | AO275_19775 | Not Available | Positive | 5780829 - 5781725 | 32219.8 |
| hypothetical protein | AO275_19780 | Not Available | Positive | 5782565 - 5787238 | 172652.0 |
| peptidase m23 | AO275_19785 | Not Available | Positive | 5787396 - 5788298 | 32302.9 |
| hypothetical protein | AO275_19790 | Not Available | Negative | 5788357 - 5789697 | 50132.3 |
| histidine kinase | AO275_19795 | Not Available | Negative | 5789796 - 5791118 | 49869.7 |
| phosphate regulon transcriptional regulatory protein phob | AO275_19800 | Not Available | Negative | 5791180 - 5791869 | 25612.9 |
| hypothetical protein | AO275_19805 | Not Available | Positive | 5792032 - 5792409 | 13329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
