Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_19710 | Not Available | Negative | 5766643 - 5767296 | 25222.7 |
| n5-carboxyaminoimidazole ribonucleotide mutase | AO275_19715 | Not Available | Positive | 5767657 - 5768148 | 16881.6 |
| phosphoribosylaminoimidazole carboxylase | AO275_19720 | Not Available | Positive | 5768158 - 5769240 | 38774.3 |
| transglycosylase | AO275_19725 | Not Available | Positive | 5769610 - 5769855 | 8283.68 |
| hypothetical protein | AO275_19730 | Not Available | Positive | 5769939 - 5770472 | 19382.8 |
| aldose epimerase | AO275_19735 | Not Available | Negative | 5770485 - 5771396 | 34033.1 |
| long-chain acyl-coa thioester hydrolase | AO275_19740 | Not Available | Negative | 5771506 - 5771907 | 14492.5 |
| mfs transporter | AO275_19745 | Not Available | Positive | 5772335 - 5773624 | 46019.9 |
| phosphate-binding protein | AO275_19750 | Not Available | Positive | 5773777 - 5774775 | 34995.8 |
| phosphate abc transporter permease | AO275_19755 | Not Available | Positive | 5774914 - 5777199 | 83556.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
