Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_19610 | Not Available | Negative | 5741122 - 5741964 | 30170.8 |
| dna helicase ii | AO275_19615 | Not Available | Negative | 5742264 - 5744447 | 81603.5 |
| diguanylate cyclase | AO275_19620 | Not Available | Positive | 5744736 - 5747228 | 93067.3 |
| transcriptional regulator | AO275_19625 | Not Available | Positive | 5747413 - 5748279 | 31041.7 |
| hypothetical protein | AO275_19630 | Not Available | Negative | 5748376 - 5748687 | 11288.2 |
| hypothetical protein | AO275_19635 | Not Available | Positive | 5748908 - 5749129 | 8602.97 |
| lysr family transcriptional regulator | AO275_19640 | Not Available | Negative | 5749083 - 5750033 | 35680.4 |
| pyruvate carboxylase subunit a | AO275_19645 | Not Available | Positive | 5750213 - 5751628 | 51949.4 |
| pyruvate carboxylase subunit b | AO275_19650 | Not Available | Positive | 5751640 - 5753448 | 65736.3 |
| gnat family acetyltransferase | AO275_19655 | Not Available | Negative | 5753691 - 5754383 | 26153.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
