Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | AO275_19560 | Not Available | Negative | 5732730 - 5733119 | 13849.4 |
| 4-hydroxytetrahydrobiopterin dehydratase | AO275_19565 | Not Available | Positive | 5733262 - 5734470 | 45196.3 |
| hypothetical protein | AO275_19570 | Not Available | Positive | 5734470 - 5735120 | 23710.4 |
| nadh:ubiquinone oxidoreductase | AO275_19575 | Not Available | Negative | 5735127 - 5735498 | 13475.2 |
| cobalamin biosynthesis protein cobw | AO275_19580 | Not Available | Positive | 5735551 - 5736531 | 35440.9 |
| hypothetical protein | AO275_19585 | Not Available | Negative | 5736572 - 5736964 | 15021.2 |
| pyridoxamine kinase | AO275_19590 | Not Available | Positive | 5737079 - 5737945 | 31040.7 |
| acyl-coa hydrolase | AO275_19595 | Not Available | Negative | 5737992 - 5738477 | 18169.8 |
| potassium transporter | AO275_19600 | Not Available | Positive | 5738778 - 5740544 | 64008.3 |
| cell wall assembly protein | AO275_19605 | Not Available | Negative | 5740584 - 5740991 | 15569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
