Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AO275_19510 | Not Available | Negative | 5718845 - 5720602 | 65293.1 |
| cdp-alcohol phosphatidyltransferase | AO275_19515 | Not Available | Negative | 5720636 - 5721253 | 22208.8 |
| hypothetical protein | AO275_19520 | Not Available | Positive | 5721544 - 5723499 | 70380.0 |
| protease | AO275_19525 | Not Available | Positive | 5723511 - 5724539 | 37282.0 |
| hypothetical protein | AO275_19530 | Not Available | Positive | 5724536 - 5725606 | 38231.5 |
| metal-transporting atpase | AO275_19535 | Not Available | Positive | 5725603 - 5727528 | 66719.8 |
| fatty acid methyltransferase | AO275_19540 | Not Available | Positive | 5727821 - 5729008 | 44530.0 |
| cardiolipin synthase | AO275_19545 | Not Available | Negative | 5729171 - 5730610 | 53579.9 |
| hypothetical protein | AO275_19550 | Not Available | Positive | 5730777 - 5731298 | 19000.0 |
| n-acetylmuramoyl-l-alanine amidase | AO275_19555 | Not Available | Positive | 5731497 - 5732723 | 44389.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
