Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase | AO275_19355 | Not Available | Positive | 5680703 - 5682070 | 48554.3 |
| xre family transcriptional regulator | AO275_19360 | Not Available | Positive | 5682216 - 5682983 | 28030.7 |
| glucosamine--fructose-6-phosphate aminotransferase | AO275_19365 | Not Available | Positive | 5682993 - 5684828 | 66320.0 |
| hypothetical protein | AO275_19370 | Not Available | Positive | 5685092 - 5685730 | 24404.1 |
| abc transporter permease | AO275_19375 | Not Available | Negative | 5685795 - 5686835 | 36843.0 |
| iron abc transporter substrate-binding protein | AO275_19380 | Not Available | Negative | 5686832 - 5687791 | 34984.9 |
| histidinol phosphatase | AO275_19385 | Not Available | Negative | 5687793 - 5688572 | 28567.4 |
| tonb-dependent receptor | AO275_19390 | Not Available | Negative | 5688572 - 5690353 | 66473.1 |
| sam-dependent methyltransferase | AO275_19395 | Not Available | Negative | 5690903 - 5691847 | 34441.8 |
| hypothetical protein | AO275_19400 | Not Available | Negative | 5691844 - 5693283 | 53882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
