Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | AO275_19305 | Not Available | Positive | 5672441 - 5673313 | 32134.0 |
| atp synthase f0f1 subunit i | AO275_19310 | Not Available | Positive | 5673460 - 5673867 | 14854.8 |
| atp synthase f0f1 subunit a | AO275_19315 | Not Available | Positive | 5673884 - 5674753 | 31774.5 |
| atp synthase f0f1 subunit c | AO275_19320 | Not Available | Positive | 5674893 - 5675150 | 8609.06 |
| atp synthase subunit b | AO275_19325 | Not Available | Positive | 5675208 - 5675678 | 16983.4 |
| atp synthase f0f1 subunit delta | AO275_19330 | Not Available | Positive | 5675691 - 5676227 | 19342.2 |
| atp synthase subunit alpha | AO275_19335 | Not Available | Positive | 5676249 - 5677793 | 55430.5 |
| atp f0f1 synthase subunit gamma | AO275_19340 | Not Available | Positive | 5677844 - 5678704 | 31426.0 |
| atp synthase subunit beta | AO275_19345 | Not Available | Positive | 5678732 - 5680111 | 49580.3 |
| atp synthase f0f1 subunit epsilon | AO275_19350 | Not Available | Positive | 5680156 - 5680581 | 14761.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
