Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter peripheral membrane component | AO275_19205 | Not Available | Positive | 5649236 - 5650609 | 49882.2 |
| lipid a biosynthesis lauroyl acyltransferase | AO275_19210 | Not Available | Negative | 5650697 - 5651584 | 32785.3 |
| 3-methyladenine dna glycosylase | AO275_19215 | Not Available | Negative | 5651622 - 5652173 | 21005.5 |
| glycine--trna ligase subunit alpha | AO275_19220 | Not Available | Positive | 5652253 - 5653200 | 36004.6 |
| glycine--trna ligase subunit beta | AO275_19225 | Not Available | Positive | 5653197 - 5655251 | 75051.0 |
| histidinol phosphatase | AO275_19230 | Not Available | Positive | 5655265 - 5655819 | 19620.6 |
| glycerol acyltransferase | AO275_19235 | Not Available | Positive | 5655874 - 5656644 | 28654.1 |
| glyoxalase | AO275_19240 | Not Available | Positive | 5657035 - 5657568 | 20207.0 |
| dna gyrase subunit b | AO275_19245 | Not Available | Negative | 5657672 - 5660089 | 90160.4 |
| recombinase recf | AO275_19250 | Not Available | Negative | 5660094 - 5661197 | 41597.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
