Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase | AO275_17570 | Not Available | Negative | 448063 - 448980 | 35298.3 |
| metal-binding protein | AO275_17575 | Not Available | Negative | 449132 - 449890 | 27619.0 |
| 2-alkenal reductase | AO275_17580 | Not Available | Positive | 450001 - 451161 | 40955.6 |
| histidinol-phosphate aminotransferase | AO275_17585 | Not Available | Negative | 451374 - 452426 | 38944.5 |
| histidinol dehydrogenase | AO275_17590 | Not Available | Negative | 452426 - 453772 | 48090.2 |
| atp phosphoribosyltransferase | AO275_17595 | Not Available | Negative | 453897 - 454532 | 22964.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AO275_17600 | Not Available | Negative | 454688 - 455953 | 44950.1 |
| bola family transcriptional regulator | AO275_17605 | Not Available | Negative | 455976 - 456215 | 8891.65 |
| anti-anti-sigma factor | AO275_17610 | Not Available | Negative | 456329 - 456634 | 10782.2 |
| toluene tolerance protein | AO275_17615 | Not Available | Negative | 456631 - 457284 | 23863.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
