Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydrase | AO275_19055 | Not Available | Positive | 5623058 - 5623606 | 19581.7 |
| had family hydrolase | AO275_19060 | Not Available | Positive | 5623630 - 5624283 | 24753.5 |
| aminopeptidase | AO275_19065 | Not Available | Negative | 5624438 - 5625493 | 40136.7 |
| hypothetical protein | AO275_19070 | Not Available | Positive | 5625587 - 5626000 | 15368.3 |
| hypothetical protein | AO275_19075 | Not Available | Negative | 5626001 - 5626234 | 8502.14 |
| osmotically inducible protein osmc | AO275_19080 | Not Available | Negative | 5626383 - 5626814 | 14954.9 |
| hypothetical protein | AO275_19085 | Not Available | Positive | 5627028 - 5628029 | 36584.0 |
| hypothetical protein | AO275_19090 | Not Available | Negative | 5628163 - 5628387 | 7626.32 |
| dodecin flavoprotein | AO275_19095 | Not Available | Negative | 5628535 - 5628753 | 8145.55 |
| hypothetical protein | AO275_19100 | Not Available | Positive | 5628920 - 5629246 | 11722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
