Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | AO275_18905 | Not Available | Negative | 5592966 - 5595731 | 100753.0 |
| hypothetical protein | AO275_18910 | Not Available | Positive | 5595806 - 5596093 | 10744.0 |
| homoserine kinase | AO275_18915 | Not Available | Positive | 5596128 - 5597078 | 35418.6 |
| abc transporter substrate-binding protein | AO275_18920 | Not Available | Negative | 5597215 - 5598153 | 33684.2 |
| fur family transcriptional regulator | AO275_18925 | Not Available | Positive | 5598221 - 5598703 | 17281.7 |
| zinc abc transporter atp-binding protein | AO275_18930 | Not Available | Positive | 5598703 - 5599500 | 28815.9 |
| hypothetical protein | AO275_18935 | Not Available | Positive | 5599493 - 5600281 | 27379.0 |
| hypothetical protein | AO275_18940 | Not Available | Positive | 5600320 - 5601036 | 25851.2 |
| hydroperoxidase | AO275_18945 | Not Available | Negative | 5601187 - 5603334 | 78810.9 |
| methionine abc transporter atp-binding protein | AO275_18950 | Not Available | Positive | 5603645 - 5604652 | 36715.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
