Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | AO275_18705 | Not Available | Positive | 5550484 - 5551389 | 32037.4 |
| hypothetical protein | AO275_18710 | Not Available | Negative | 5551459 - 5552040 | 21191.2 |
| orotate phosphoribosyltransferase | AO275_18715 | Not Available | Negative | 5552114 - 5552755 | 23055.5 |
| exodeoxyribonuclease iii | AO275_18720 | Not Available | Positive | 5552837 - 5553616 | 29870.4 |
| orotate phosphoribosyltransferase | AO275_18725 | Not Available | Negative | 5553686 - 5554054 | 13478.9 |
| ribonuclease ph | AO275_18730 | Not Available | Negative | 5554073 - 5554795 | 25737.1 |
| hypothetical protein | AO275_18735 | Not Available | Positive | 5555102 - 5555965 | 32116.6 |
| guanylate kinase | AO275_18740 | Not Available | Positive | 5555979 - 5556599 | 23489.6 |
| dna-directed rna polymerase subunit omega | AO275_18745 | Not Available | Positive | 5556747 - 5557010 | 9678.46 |
| (p)ppgpp synthetase | AO275_18750 | Not Available | Positive | 5557071 - 5559176 | 78515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
