Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | AO275_18655 | Not Available | Negative | 5540223 - 5541716 | 52804.2 |
| transcriptional regulator | AO275_18660 | Not Available | Positive | 5541955 - 5542326 | 13932.3 |
| hypothetical protein | AO275_18665 | Not Available | Positive | 5542400 - 5542603 | 7735.28 |
| 50s ribosomal protein l33 | AO275_18670 | Not Available | Negative | 5542750 - 5542905 | 5992.4 |
| 50s ribosomal protein l28 | AO275_18675 | Not Available | Negative | 5542917 - 5543150 | 8936.03 |
| peptide abc transporter substrate-binding protein | AO275_18680 | Not Available | Positive | 5543514 - 5545100 | 58026.2 |
| hypothetical protein | AO275_18685 | Not Available | Negative | 5545339 - 5546013 | 24942.5 |
| phosphopantothenoylcysteine decarboxylase | AO275_18690 | Not Available | Positive | 5546147 - 5547355 | 43104.1 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | AO275_18695 | Not Available | Positive | 5547362 - 5547817 | 16070.5 |
| phosphomannomutase | AO275_18700 | Not Available | Positive | 5547849 - 5550455 | 93040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
