Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | AO275_17520 | Not Available | Negative | 437031 - 438245 | 45850.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AO275_17525 | Not Available | Negative | 438245 - 438838 | 20877.1 |
| 30s ribosomal protein s9 | AO275_17530 | Not Available | Negative | 439092 - 439484 | 14603.7 |
| 50s ribosomal protein l13 | AO275_17535 | Not Available | Negative | 439499 - 439927 | 15923.3 |
| arac family transcriptional regulator | AO275_17540 | Not Available | Positive | 440322 - 441317 | 37953.1 |
| atpase | AO275_17545 | Not Available | Negative | 441391 - 442485 | 42086.6 |
| tryptophan--trna ligase | AO275_17550 | Not Available | Negative | 442547 - 443896 | 49296.7 |
| alpha/beta hydrolase | AO275_17555 | Not Available | Negative | 443924 - 444553 | 22711.2 |
| cytochrome d ubiquinol oxidase subunit iii | AO275_17560 | Not Available | Positive | 444699 - 445133 | 16213.2 |
| adenylylsulfate kinase | AO275_17565 | Not Available | Negative | 446153 - 448051 | 69054.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
