Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine racemase | AO275_18605 | Not Available | Negative | 5529945 - 5531018 | 38614.5 |
| cytochrome c2 | AO275_18610 | Not Available | Negative | 5531091 - 5531444 | 12830.5 |
| amino acid dehydrogenase | AO275_18615 | Not Available | Negative | 5531416 - 5532717 | 47153.7 |
| asnc family transcriptional regulator | AO275_18620 | Not Available | Positive | 5532875 - 5533363 | 18688.8 |
| fe-s oxidoreductase | AO275_18625 | Not Available | Negative | 5533373 - 5533726 | 13056.9 |
| fad-dependent oxidoreductase | AO275_18630 | Not Available | Positive | 5533833 - 5535146 | 47588.3 |
| hypothetical protein | AO275_18635 | Not Available | Negative | 5535153 - 5535404 | 9946.83 |
| gntr family transcriptional regulator | AO275_18640 | Not Available | Positive | 5535837 - 5537258 | 52471.6 |
| phospholipase | AO275_18645 | Not Available | Positive | 5537330 - 5538910 | 58794.2 |
| mfs transporter | AO275_18650 | Not Available | Negative | 5538907 - 5540052 | 39946.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
