Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | AO275_18555 | Not Available | Negative | 5517282 - 5518955 | 62005.4 |
| atp-dependent dna helicase rep | AO275_18560 | Not Available | Positive | 5519161 - 5521170 | 76568.6 |
| xanthine phosphoribosyltransferase | AO275_18565 | Not Available | Positive | 5521223 - 5521792 | 20171.5 |
| fis family transcriptional regulator | AO275_18570 | Not Available | Negative | 5521799 - 5523118 | 48511.4 |
| mbl fold metallo-hydrolase | AO275_18575 | Not Available | Positive | 5523397 - 5524281 | 32449.0 |
| pyridine nucleotide-disulfide oxidoreductase | AO275_18580 | Not Available | Positive | 5524307 - 5525560 | 45253.5 |
| hypothetical protein | AO275_18585 | Not Available | Positive | 5525553 - 5526371 | 27599.1 |
| acetyl-coa hydrolase | AO275_18590 | Not Available | Negative | 5526429 - 5528354 | 71446.2 |
| cytochrome c | AO275_18595 | Not Available | Negative | 5528654 - 5529076 | 14283.2 |
| xre family transcriptional regulator | AO275_18600 | Not Available | Negative | 5529261 - 5529809 | 19923.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
