Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AO275_08635 | Not Available | Positive | 5492164 - 5493045 | 31965.8 |
| phenazine biosynthesis protein phzf | AO275_08640 | Not Available | Positive | 5493275 - 5494156 | 31489.6 |
| hypothetical protein | AO275_08645 | Not Available | Negative | 5494250 - 5495071 | 28705.5 |
| alcohol dehydrogenase | AO275_08650 | Not Available | Negative | 5495225 - 5496274 | 36324.8 |
| short-chain dehydrogenase | AO275_08655 | Not Available | Negative | 5496334 - 5497086 | 26614.2 |
| osmotically inducible protein c | AO275_08660 | Not Available | Negative | 5497097 - 5498338 | 43810.1 |
| amine oxidase | AO275_08665 | Not Available | Negative | 5498372 - 5499487 | 40580.1 |
| anti-sigma factor | AO275_08670 | Not Available | Negative | 5499488 - 5500156 | 24479.7 |
| alkylhydroperoxidase | AO275_08675 | Not Available | Negative | 5500221 - 5500565 | 12327.8 |
| sugar dehydrogenase | AO275_08680 | Not Available | Negative | 5500633 - 5501406 | 27165.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
