Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase | AO275_08535 | Not Available | Positive | 5468734 - 5470260 | 54026.5 |
| xylose isomerase | AO275_08540 | Not Available | Positive | 5470303 - 5471163 | 32525.2 |
| 2og-fe(ii) oxygenase | AO275_08545 | Not Available | Positive | 5471160 - 5472197 | 38469.5 |
| amino acid abc transporter substrate-binding protein | AO275_08550 | Not Available | Positive | 5472230 - 5473024 | 28559.2 |
| amino acid abc transporter permease/atp-binding protein | AO275_08555 | Not Available | Positive | 5473287 - 5474804 | 55919.7 |
| hypothetical protein | AO275_08560 | Not Available | Positive | 5474801 - 5476402 | 57525.1 |
| aldehyde dehydrogenase | AO275_08565 | Not Available | Positive | 5476460 - 5477887 | 51159.6 |
| hypothetical protein | AO275_08570 | Not Available | Positive | 5478792 - 5479931 | 40544.5 |
| hypothetical protein | AO275_08575 | Not Available | Positive | 5479962 - 5481158 | 44956.3 |
| energy transducer tonb | AO275_08580 | Not Available | Positive | 5481513 - 5482316 | 27596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
