Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | AO275_08385 | Not Available | Positive | 5436694 - 5437725 | 35973.4 |
| iron abc transporter atp-binding protein | AO275_08390 | Not Available | Positive | 5437736 - 5438527 | 28951.3 |
| siderophore-iron reductase, fe-s cluster protein | AO275_08395 | Not Available | Positive | 5438524 - 5439303 | 29264.0 |
| s-adenosylmethionine--2-demethylmenaquinone methyltransferase | AO275_08400 | Not Available | Positive | 5439290 - 5439946 | 23288.1 |
| response regulator | AO275_08405 | Not Available | Negative | 5440021 - 5440458 | 15642.7 |
| pectate lyase | AO275_08410 | Not Available | Negative | 5440585 - 5441832 | 44035.6 |
| dna-binding transcriptional regulator | AO275_08415 | Not Available | Negative | 5442130 - 5443077 | 34719.8 |
| mfs transporter | AO275_08420 | Not Available | Negative | 5443152 - 5443955 | 28803.5 |
| short-chain dehydrogenase | AO275_08425 | Not Available | Negative | 5444020 - 5444784 | 26715.2 |
| sugar abc transporter | AO275_08430 | Not Available | Negative | 5444795 - 5446306 | 53843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
