Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| division/cell wall cluster transcriptional repressor mraz | AO275_17475 | Not Available | Negative | 429101 - 429556 | 17166.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 429863 - 430220 | Not Available |
| methyltransferase | AO275_17480 | Not Available | Negative | 430309 - 431178 | 31360.0 |
| hypothetical protein | AO275_17485 | Not Available | Positive | 431453 - 433267 | 65307.8 |
| hypothetical protein | AO275_17490 | Not Available | Positive | 433264 - 433638 | 13910.5 |
| phosphoheptose isomerase | AO275_17495 | Not Available | Positive | 433761 - 434354 | 21303.5 |
| phospholipid-binding protein | AO275_17500 | Not Available | Positive | 434351 - 434929 | 20517.8 |
| peptidase | AO275_17505 | Not Available | Negative | 434979 - 435395 | 15232.8 |
| stringent starvation protein a | AO275_17510 | Not Available | Negative | 435413 - 436030 | 23343.3 |
| cytochrome c | AO275_17515 | Not Available | Negative | 436255 - 437034 | 28884.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
