Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase | AO275_08280 | Not Available | Positive | 5382499 - 5382960 | 16197.4 |
| dna-binding protein | AO275_08285 | Not Available | Positive | 5383024 - 5384004 | 35430.7 |
| quinoprotein | AO275_08290 | Not Available | Positive | 5384391 - 5386757 | 85894.4 |
| luxr family transcriptional regulator | AO275_08295 | Not Available | Negative | 5386912 - 5387679 | 27495.1 |
| non-ribosomal peptide synthetase | AO275_08300 | Not Available | Positive | 5388019 - 5397510 | 348792.0 |
| hemolysin secretion protein d | AO275_08310 | Not Available | Positive | 5415564 - 5416715 | 41462.6 |
| macrolide transporter | AO275_08315 | Not Available | Positive | 5416717 - 5418726 | 72766.7 |
| luxr family transcriptional regulator | AO275_08320 | Not Available | Negative | 5418701 - 5419411 | 26284.5 |
| rna polymerase subunit sigma | AO275_08325 | Not Available | Positive | 5419934 - 5420443 | 19686.4 |
| sugar abc transporter substrate-binding protein | AO275_08330 | Not Available | Positive | 5420440 - 5421405 | 35519.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
