Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m38 | AO275_08130 | Not Available | Negative | 5347649 - 5348908 | 44646.0 |
| mfs transporter | AO275_08135 | Not Available | Negative | 5348905 - 5350218 | 46783.7 |
| lysr family transcriptional regulator | AO275_08140 | Not Available | Negative | 5350407 - 5351309 | 33395.3 |
| lysr family transcriptional regulator | AO275_08145 | Not Available | Negative | 5351322 - 5352227 | 33045.9 |
| hypothetical protein | AO275_08150 | Not Available | Positive | 5352382 - 5355429 | 112088.0 |
| dienelactone hydrolase | AO275_08155 | Not Available | Negative | 5355546 - 5356433 | 32447.3 |
| diguanylate cyclase | AO275_08160 | Not Available | Positive | 5356750 - 5357841 | 41017.2 |
| geranylgeranyl pyrophosphate synthase | AO275_08165 | Not Available | Negative | 5357813 - 5358715 | 32888.8 |
| isopentenyl pyrophosphate isomerase | AO275_08170 | Not Available | Positive | 5358882 - 5359931 | 36773.4 |
| zeaxanthin glucosyltransferase | AO275_08175 | Not Available | Positive | 5359928 - 5361208 | 46807.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
