Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | AO275_08080 | Not Available | Negative | 5334744 - 5335739 | 36239.9 |
| lexa family transcriptional regulator | AO275_08085 | Not Available | Positive | 5335941 - 5336558 | 22452.1 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | AO275_08090 | Not Available | Positive | 5336558 - 5337178 | 21839.6 |
| dna repair nucleotidyltransferase | AO275_08095 | Not Available | Positive | 5337186 - 5338601 | 52953.1 |
| dna polymerase | AO275_08100 | Not Available | Positive | 5338598 - 5341693 | 117005.0 |
| hypothetical protein | AO275_08105 | Not Available | Positive | 5341765 - 5342616 | 31944.9 |
| magnesium transporter | AO275_08110 | Not Available | Negative | 5342760 - 5343689 | 34974.6 |
| carboxylate--amine ligase | AO275_08115 | Not Available | Negative | 5343696 - 5345282 | 59854.7 |
| ribosomal-protein-alanine acetyltransferase | AO275_08120 | Not Available | Positive | 5345375 - 5346502 | 42292.8 |
| polysaccharide deacetylase | AO275_08125 | Not Available | Positive | 5346593 - 5347492 | 33357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
