Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AO275_07910 | Not Available | Negative | 5303175 - 5304392 | 42281.6 |
| 6-phosphogluconolactonase | AO275_07915 | Not Available | Positive | 5304556 - 5305689 | 40424.1 |
| abc transporter atp-binding protein | AO275_07920 | Not Available | Negative | 5305787 - 5307376 | 58984.4 |
| hypothetical protein | AO275_07935 | Not Available | Positive | 5309381 - 5309605 | 7527.87 |
| hypothetical protein | AO275_07940 | Not Available | Positive | 5310049 - 5310375 | 11994.3 |
| hypothetical protein | AO275_07950 | Not Available | Negative | 5311084 - 5311596 | 18681.2 |
| chemotaxis protein | AO275_07955 | Not Available | Positive | 5312219 - 5314135 | 68895.9 |
| lipopolysaccharide biosynthesis protein | AO275_07960 | Not Available | Negative | 5314229 - 5315029 | 29400.3 |
| hypothetical protein | AO275_07965 | Not Available | Positive | 5315376 - 5315837 | 15939.1 |
| hypothetical protein | AO275_07970 | Not Available | Positive | 5316024 - 5316725 | 25677.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
