Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--alanine ligase | AO275_17425 | Not Available | Negative | 417156 - 418616 | 52800.8 |
| udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | AO275_17430 | Not Available | Negative | 418609 - 419679 | 38004.5 |
| cell division protein ftsw | AO275_17435 | Not Available | Negative | 419669 - 420883 | 44049.0 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | AO275_17440 | Not Available | Negative | 420880 - 422226 | 47977.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | AO275_17445 | Not Available | Negative | 422232 - 423314 | 39468.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | AO275_17450 | Not Available | Negative | 423314 - 424684 | 47582.0 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | AO275_17455 | Not Available | Negative | 424677 - 426140 | 52095.1 |
| cell division protein | AO275_17460 | Not Available | Negative | 426140 - 427870 | 62889.2 |
| cell division protein ftsl | AO275_17465 | Not Available | Negative | 427867 - 428160 | 10885.5 |
| ribosomal rna small subunit methyltransferase h | AO275_17470 | Not Available | Negative | 428157 - 429104 | 34603.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
