Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | AO275_07760 | Not Available | Positive | 5251857 - 5252957 | 40736.9 |
| hypothetical protein | AO275_07765 | Not Available | Negative | 5252939 - 5253169 | 8356.29 |
| methionine synthase | AO275_07770 | Not Available | Negative | 5253274 - 5256993 | 136324.0 |
| peptidylprolyl isomerase | AO275_07775 | Not Available | Positive | 5257150 - 5259453 | 86082.3 |
| acyltransferase | AO275_07780 | Not Available | Positive | 5259633 - 5260655 | 38373.8 |
| fe/s biogenesis protein nfua | AO275_07785 | Not Available | Positive | 5260770 - 5261363 | 21459.2 |
| 3-methylcrotonyl-coa carboxylase | AO275_07790 | Not Available | Negative | 5261429 - 5263384 | 70740.3 |
| gamma-carboxygeranoyl-coa hydratase | AO275_07795 | Not Available | Negative | 5263381 - 5264220 | 30557.6 |
| methylcrotonoyl-coa carboxylase | AO275_07800 | Not Available | Negative | 5264229 - 5265836 | 57773.6 |
| isovaleryl-coa dehydrogenase | AO275_07805 | Not Available | Negative | 5265850 - 5267013 | 42490.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
