Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh pyrophosphatase | AO275_07710 | Not Available | Positive | 5241659 - 5242495 | 31137.3 |
| hypothetical protein | AO275_07715 | Not Available | Negative | 5242463 - 5243242 | 27131.6 |
| 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase | AO275_07720 | Not Available | Negative | 5243316 - 5244464 | 41169.9 |
| short-chain dehydrogenase | AO275_07725 | Not Available | Negative | 5244575 - 5245342 | 26651.2 |
| aminoglycoside phosphotransferase | AO275_07730 | Not Available | Negative | 5245366 - 5246433 | 40614.4 |
| scp-2 family sterol carrier protein | AO275_07735 | Not Available | Negative | 5246641 - 5246958 | 11227.5 |
| phosphoglycerate mutase | AO275_07740 | Not Available | Negative | 5247028 - 5247738 | 25965.2 |
| peptidase | AO275_07745 | Not Available | Positive | 5247942 - 5248973 | 38325.5 |
| oxidoreductase | AO275_07750 | Not Available | Negative | 5249182 - 5249676 | 18873.2 |
| sulfite reductase | AO275_07755 | Not Available | Negative | 5249660 - 5251318 | 62342.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
