Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | AO275_07660 | Not Available | Negative | 5228180 - 5229511 | 49605.2 |
| response regulator | AO275_07665 | Not Available | Negative | 5229498 - 5229863 | 13485.3 |
| chemotaxis protein chey | AO275_07670 | Not Available | Positive | 5230195 - 5233701 | 131247.0 |
| chemotaxis protein cher | AO275_07675 | Not Available | Positive | 5233748 - 5234569 | 31492.6 |
| chemotaxis protein cheb | AO275_07680 | Not Available | Positive | 5234566 - 5235180 | 22021.4 |
| histidine kinase | AO275_07685 | Not Available | Positive | 5235174 - 5236355 | 44246.8 |
| chemotaxis protein chey | AO275_07690 | Not Available | Positive | 5236469 - 5236846 | 13535.6 |
| histidine kinase | AO275_07695 | Not Available | Negative | 5237078 - 5239108 | 74611.3 |
| circadian clock protein kaic | AO275_07700 | Not Available | Negative | 5239105 - 5240589 | 54714.9 |
| enoyl-coa hydratase | AO275_07705 | Not Available | Positive | 5240807 - 5241619 | 29660.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
