Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | AO275_07610 | Not Available | Negative | 5216871 - 5217809 | 33861.5 |
| xylulose kinase | AO275_07615 | Not Available | Negative | 5217834 - 5219315 | 52281.3 |
| mannitol dehydrogenase | AO275_07620 | Not Available | Negative | 5219325 - 5220806 | 54589.2 |
| abc transporter atp-binding protein | AO275_07625 | Not Available | Negative | 5220825 - 5221931 | 39970.5 |
| sugar abc transporter permease | AO275_07630 | Not Available | Negative | 5221963 - 5222796 | 31002.7 |
| sugar abc transporter permease | AO275_07635 | Not Available | Negative | 5222807 - 5223739 | 33847.2 |
| sugar abc transporter substrate-binding protein | AO275_07640 | Not Available | Negative | 5223815 - 5225137 | 48247.1 |
| arac family transcriptional regulator | AO275_07645 | Not Available | Negative | 5225377 - 5226282 | 34697.4 |
| precorrin 6a synthase | AO275_07650 | Not Available | Positive | 5226412 - 5227191 | 29309.1 |
| bro domain-containing protein | AO275_07655 | Not Available | Negative | 5227213 - 5227764 | 21596.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
