Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | AO275_07505 | Not Available | Negative | 5199505 - 5200446 | 34354.1 |
| hypothetical protein | AO275_07510 | Not Available | Positive | 5200698 - 5201258 | 21255.1 |
| filamentous hemagglutinin | AO275_07515 | Not Available | Negative | 5201423 - 5201605 | 6467.85 |
| hypothetical protein | AO275_07520 | Not Available | Negative | 5201779 - 5202147 | 13458.0 |
| shikimate dehydrogenase | AO275_07525 | Not Available | Positive | 5202371 - 5203183 | 28781.3 |
| hypothetical protein | AO275_07530 | Not Available | Negative | 5203196 - 5203864 | 24585.4 |
| hypothetical protein | AO275_07535 | Not Available | Positive | 5204009 - 5204518 | 18831.8 |
| lysr family transcriptional regulator | AO275_07545 | Not Available | Negative | 5205140 - 5206042 | 33199.3 |
| hypothetical protein | AO275_07550 | Not Available | Positive | 5206175 - 5206417 | 8380.91 |
| hypothetical protein | AO275_07555 | Not Available | Positive | 5206456 - 5207214 | 27402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
