Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | ICMP 8820 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | AO275_07455 | Not Available | Positive | 5189964 - 5190467 | 18790.9 |
| nudix hydrolase | AO275_07460 | Not Available | Negative | 5190523 - 5191086 | 21172.4 |
| gntr family transcriptional regulator | AO275_07465 | Not Available | Negative | 5191088 - 5191840 | 28069.9 |
| flavin reductase | AO275_07470 | Not Available | Negative | 5192015 - 5192500 | 17227.9 |
| carnitine dehydratase | AO275_07475 | Not Available | Negative | 5192514 - 5193995 | 53178.6 |
| 3-oxoadipate enol-lactonase | AO275_07480 | Not Available | Negative | 5193992 - 5194825 | 29918.9 |
| peptide synthetase | AO275_07485 | Not Available | Negative | 5194859 - 5195449 | 21520.8 |
| aldehyde dehydrogenase | AO275_07490 | Not Available | Positive | 5195687 - 5196826 | 40597.4 |
| dehydrogenase | AO275_07495 | Not Available | Positive | 5196893 - 5197759 | 31171.2 |
| aldehyde dehydrogenase | AO275_07500 | Not Available | Positive | 5198004 - 5199434 | 50625.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
